API for kgori/sigfit
Flexible Bayesian inference of mutational signatures
| Global functions | |
|---|---|
| build_catalogues | Man page Source code |
| build_opps_matrix | Man page Source code |
| calculate_gof | Man page Source code |
| convert_signatures | Man page Source code |
| cosine_sim | Man page Source code |
| cosmic_signatures_doublet_v3.2 | Man page |
| cosmic_signatures_indel_v3.2 | Man page |
| cosmic_signatures_strand_v3 | Man page |
| cosmic_signatures_v2 | Man page |
| cosmic_signatures_v3 | Man page |
| cosmic_signatures_v3.2 | Man page |
| default_sig_palette | Man page Source code |
| extract_signatures | Man page Source code |
| extract_signatures_initialiser | Man page Source code |
| fetch_cosmic_data | Man page Source code |
| fit_extract_signatures | Man page Source code |
| fit_signatures | Man page Source code |
| get_initializer_list | Man page Source code |
| get_loglik | Man page Source code |
| get_reconstructions | Man page Source code |
| human_trinuc_freqs | Man page Source code |
| l2_norm | Man page Source code |
| letterwrap | Man page Source code |
| make_colors | Man page Source code |
| match_signatures | Man page Source code |
| mut_types | Man page Source code |
| plot_all | Man page Source code |
| plot_exposures | Man page Source code |
| plot_gof | Man page Source code |
| plot_ppc | Man page Source code |
| plot_reconstruction | Man page Source code |
| plot_spectrum | Man page Source code |
| plot_spectrum_dbs | Man page Source code |
| plot_spectrum_generic | Man page Source code |
| plot_spectrum_id | Man page Source code |
| plot_spectrum_sbs | Man page Source code |
| plot_spectrum_tsw | Man page Source code |
| remove_zeros_ | Man page Source code |
| retrieve_pars | Man page Source code |
| rev_comp | Man page Source code |
| sigfit | Man page |
| sigfit-package | Man page |
| simulate_ppc | Man page Source code |
| stan_models | Man page Source code |
| to_matrix | Man page Source code |
