updateMinPvals: Calculate minial p values for QCDH
In kindlychung/CollapsABEL: An R package for quantitative CDH analysis
View source: R/updateMinPvals.R
Description
This function calculates minimal p values for each collection of SNP pairs that share the same first SNP.
It imposes two conditions: (1) Each pair should be in the same chromosome. (2) The distance between each pair of
SNPs should be below a certain threshold (specified by user).
Usage
1
updateMinPvals(hub, bpdiff = 5e+05)
Arguments
hub
QCDH data hub
bpdiff
Numeric. Upper bound of base position distance between a pair of SNPs.
kindlychung/CollapsABEL documentation built on May 20, 2019, 9:57 a.m.
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View source: R/updateMinPvals.R
Description
This function calculates minimal p values for each collection of SNP pairs that share the same first SNP. It imposes two conditions: (1) Each pair should be in the same chromosome. (2) The distance between each pair of SNPs should be below a certain threshold (specified by user).
Usage
1 | updateMinPvals(hub, bpdiff = 5e+05)
|
Arguments
hub |
QCDH data hub |
bpdiff |
Numeric. Upper bound of base position distance between a pair of SNPs. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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