Files in kindlychung/CollapsABEL
An R package for quantitative CDH analysis
.Rbuildignore
.Rd2pdf62517/Rd2.tex
.gitignore
CollapsABEL.Rproj
DESCRIPTION
NAMESPACE
R/appendEnv.R
R/appendFromPlinkOut.R
R/basePlot.R
R/bedcollinfo.R
R/bedcollr.R
R/catmat.R
R/checkBinaryTrait.R
R/checkFileExists.R
R/cleanByChrPvalBonfer.R
R/cleanDate.R
R/cleanLog.R
R/cleanSnpNames.R
R/collapse.R
R/collrinfo.R
R/contrastPlot.R
R/contrastPlot.bk.R
R/dbgtrigger.R
R/getNshiftStr.R
R/getPlinkParam.R
R/getstem.R
R/gwas.R
R/minPlot.R
R/missing.R
R/permute.R
R/plinkcollr.R
R/plinkr.R
R/pminNoNA.R
R/qcdhRoutine.R
R/readcoll.R
R/relative_diff.R
R/rep_models.R
R/routine1.R
R/shiftDataByCol.R
R/shuffleLines.R
R/snpPairLookin.quant.R
R/snpTopHits.R
R/softLinkBeds.R
R/taskAnalyze.R
R/taskBedsPlinkOut.R
R/taskinfo.R
R/updateBimFam.R
R/updateMinPvals.R
R/updateShiftFiles.R
R/updateShiftFilesStem.R
R/updateSnp2Info.R
bk_readme.md
install_tools.sh
man/appendEnv.Rd
man/appendFromPlinkOut.Rd
man/bedcollinfo.Rd
man/bedcollr.Rd
man/catmat.Rd
man/checkBinaryTrait.Rd
man/cleanByChrPvalsBonfer.Rd
man/cleanSnpNames.Rd
man/collapse.Rd
man/contrastPlot.Rd
man/dbgtrigger.Rd
man/getNshiftStr.Rd
man/getPlinkParam.Rd
man/getstem.Rd
man/gwas.Rd
man/plinkcollr.Rd
man/plinkr.Rd
man/qcdhRoutine.Rd
man/readcoll.Rd
man/rep_dat.Rd
man/rep_models.Rd
man/routine1.Rd
man/shiftDataByCol.Rd
man/snpPairLookin.quant.Rd
man/taskAnalyze.Rd
man/taskBedsPlinkOut.Rd
man/taskinfo.Rd
man/updateMinPvals.Rd
readme.html
