Description Usage Arguments Value Author(s)
Generate a volcano plot using statistical testing output
1 | volcanoPlot(pval_df, p_val = "padj", threshold = 0.1)
|
pval_df |
a dataframe that contains a column name "logfc" and a statistical testing output p values. |
p_val |
a string identifying the column name from pval_df to plot as p values |
threshold |
a numeric representing the p_value threshold on which to colour points on the volcano plot |
a ggplot
object.
James Opzoomer james.opzoomer@kcl.ac.uk
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