logratio_data: transforms compositional data for a biplot. First, each row...
In kristenmf/flowR: Flow Cytometry and Single Cell Analysis
Description
Usage
Arguments
Value
Description
transforms compositional data for a biplot. First, each row is centered on its geometrical mean, followed by log transformation. This is equivalent to the logratio of every single pair of variables. Then the data is scaled.
Usage
1
Arguments
data
Matrix of compositions. Each row sums to 1
Value
data_lr Matrix of logratios, column centered. Suitable for a biplot.
kristenmf/flowR documentation built on May 20, 2019, 6:15 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
transforms compositional data for a biplot. First, each row is centered on its geometrical mean, followed by log transformation. This is equivalent to the logratio of every single pair of variables. Then the data is scaled.
Usage
1 |
Arguments
data |
Matrix of compositions. Each row sums to 1 |
Value
data_lr Matrix of logratios, column centered. Suitable for a biplot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.