make_burt: Converts each matrix into a burt matrix, consisting of marker...

Description Usage Arguments Value

Description

Converts each matrix into a burt matrix, consisting of marker combination and frequency it occurs in that sample

Usage

1
make_burt(X, breaks, markers)

Arguments

X

list of matrices, rows are events, columns are parameters

breaks,

output from make_breaks or custom if desired.

markers

vector of character strings indicating marker names, in same order as they appear in the columns of the matrices in X

Value

list of dataframes, with markers coded as 1 for 'positive' and 0 for 'negative', and additional column 'counts' indicating the proportion of events with that marker combination. Only combinations with non-zero proportions are included. Column 'which' gives a unique index to each sample.


kristenmf/flowR documentation built on May 20, 2019, 6:15 p.m.