make_cell_coexp: For every possible pair of markers, find the ratio of the...
In kristenmf/flowR: Flow Cytometry and Single Cell Analysis
Description
Usage
Arguments
Value
Description
For every possible pair of markers, find the ratio of the frequency in each sample to the average frequency over all samples.
Usage
1
make_cell_coexp(burt, markers)
Arguments
burt
output from make_burt
markers
vector of character strings, marker names in same order as they appear in columns of burt
Value
A matrix, where each row is a vector of the ratio of a sample's frequency to the average frequency (averaged over all samples). Columns are marker pairs. When a marker combination doesn't appear in the sample, a value of 1 is given.
kristenmf/flowR documentation built on May 20, 2019, 6:15 p.m.
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Description Usage Arguments Value
Description
For every possible pair of markers, find the ratio of the frequency in each sample to the average frequency over all samples.
Usage
1 | make_cell_coexp(burt, markers)
|
Arguments
burt |
output from make_burt |
markers |
vector of character strings, marker names in same order as they appear in columns of burt |
Value
A matrix, where each row is a vector of the ratio of a sample's frequency to the average frequency (averaged over all samples). Columns are marker pairs. When a marker combination doesn't appear in the sample, a value of 1 is given.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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