make_bins: bins a dimension-reduced pooled dataset. Can be with PCA or...

In kristenmf/flowR: Flow Cytometry and Single Cell Analysis

Description

bins a dimension-reduced pooled dataset. Can be with PCA or SMA

Usage

make_bins(DONORS_reduced, sample_fac, k, l)

Arguments

DONORS_reduced	pooled dataset decomposed by PCA or SMA. Generally keep all components, because this is chosen within this function
sample_fac	index of which sample each event originated from, length(sample_fac) == nrow(D), as given by sample_data
k	the number of components to include in analysis
l	number of bins along each component

Value

grid a list of factors, one for each donor, corresponding to the binned events

xtab a table with number of events in each bin, one for each donor.

kristenmf/flowR documentation built on May 20, 2019, 6:15 p.m.