Man pages for langholee/XINA
Multiplexes isobaric mass tagged-based kinetics data for network analysis

add_legendadd_legend
alluvial_enrichedalluvial_enriched
alluvial_enrichment_testsalluvial_enrichment_tests
calculate_centrality_scorescalculate_centrality_scores
default_sizedefault_size
draw_alluvial_plotdraw_alluvial_plot
example_clustersRandomly generated example datasets for XINA users. A dataset...
extract_data_columnextract_data_column
find_similar_clustersfind_similar_clusters
generate_count_tablegenerate_count_table
generate_supersetgenerate_superset
get_color_for_nodesget_color_for_nodes
get_colorsget_colors
get_comigrations_by_nameget_comigrations_by_name
get_condition_biased_comigrationsget_condition_biased_comigrations
get_layoutget_layout
get_mTOR_proteinsget_mTOR_proteins
get_random_dataget_random_data
get_statsget_stats
get_theme_blankget_theme_blank
get_unknown_ppi_nodesget_unknown_ppi_nodes
gnA character vector containing 19,396 human genes This is for...
gn_descA character vector containing 19,396 human gene descriptions...
hprd_ppiProtein-protein interaction resource downloaded from HPRD DB...
length2length2
load_previous_resultsload_previous_results
make_random_xina_datamake_random_xina_data
mutate_colorsmutate_colors
organize_clustersorganize_clusters
plot_clustersplot_clusters
plot_clusters_allplot_clusters_all
plot_condition_compositionsplot_condition_compositions
plot_enrichment_resultsplot_enrichment_results
plot_NAplot_NA
rank_centralityrank_centrality
string_exampleProtein-protein interaction resource downloaded from STRING...
xina_analysisxina_analysis
xina_clusteringxina_clustering
xina_enrichmentxina_enrichment
xina_plot_allxina_plot_all
xina_plot_byclusterxina_plot_bycluster
xina_plot_singlexina_plot_single
xina_result_examplePreviously processed xina analysis using XINA's random...
langholee/XINA documentation built on Sept. 7, 2018, 7:08 p.m.