plot_clusters_all: plot_clusters_all

In langholee/XINA: Multiplexes Isobaric Mass Tagged-based Kinetics Data for Network Analysis

Description

Draw line graphs of all the proteins in the given dataset

Usage

plot_clusters_all(clustering_result, selected_condition = NULL)

Arguments

clustering_result	A list containing XINA clustering results. See xina_clustering
selected_condition	A condition name to draw the kinetics plot

Value

a list containing clustering results and pdf file containing a BIC plot in current working directory.

Examples

# load XINA example data
data(xina_example)

# Plot kinetics of all the proteins in Control
plot_clusters_all(example_clusters, selected_condition="Control")

# Plot kinetics of all the proteins in Stimulus1
plot_clusters_all(example_clusters, selected_condition="Stimulus1")

# Plot kinetics of all the proteins in Stimulus2
plot_clusters_all(example_clusters, selected_condition="Stimulus2")

# Plot kinetics of all the proteins in three data
plot_clusters_all(example_clusters)

langholee/XINA documentation built on March 17, 2020, 5:23 p.m.