create_gsea_plot_data: Creates a data.frame to make a GSEA plot
In lefeverde/QSPpaper: Analysis notebooks and functions for NAFLD QSP paper

create_gsea_plot_data

R Documentation

Creates a data.frame to make a GSEA plot

Description

This function creates a data.frame which can be used to create the line plot of the enrichment score. It was taken and slightly modified from the plotEnrichment.

Usage

create_gsea_plot_data(query_idx, ordered_vec, gsea_weight = 0)

Arguments

`query_idx`	indexes of query which correpond to position in `ordered_vec`
`ordered_vec`	ordered vector of scores
`gsea_weight`	power to raise the ordered vector (see `here` for details.)