doubledeepmsmochiload_fitness_for_model: doubledeepmsmochiload_fitness_for_model
In lehner-lab/doubledeepms: Analysis scripts to reproduce the figures and results from doubleDeepPCA manuscript

doubledeepms__mochi__load_fitness_for_model

R Documentation

doubledeepmsmochiload_fitness_for_model

Load fitness to be used for model fitting.

doubledeepms__mochi__load_fitness_for_model(dimsum_RData_file,
  order_subset = 0:2, sequence_type = "aminoacid",
  mean_input_count_threshold = 0)

`dimsum_RData_file`	DiMSum .RData file (required)
`order_subset`	Subset of mutation orders (default:0:2)
`sequence_type`	Sequence type: 'nucleotide' or 'aminoacid' (default:aminoacid)
`mean_input_count_threshold`	Mean input count threshold (default:0)

Data.table of fitness

lehner-lab/doubledeepms documentation built on July 21, 2023, 4:10 a.m.

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