doubledeepms_allostery_plots: doubledeepms_allostery_plots

In lehner-lab/doubledeepms: Analysis scripts to reproduce the figures and results from doubleDeepPCA manuscript

doubledeepms_allostery_plots

Description

Plot free energy heatmaps.

Usage

doubledeepms_allostery_plots(input_file, pdb_file_list,
  pdb_chain_query_list, annotation_list, ohm_file_list, outpath,
  colour_scheme, execute = TRUE)

Arguments

input_file	path to input file (required)
pdb_file_list	path to PDB file (required)
pdb_chain_query_list	query chain id (required)
annotation_list	annotations of allosteric sites (required)
ohm_file_list	ohm output file list (required)
outpath	output path for plots and saved objects (required)
colour_scheme	colour scheme file (required)
execute	whether or not to execute the analysis (default: TRUE)

Value

Nothing

lehner-lab/doubledeepms documentation built on July 21, 2023, 4:10 a.m.