doubledeepms__persite_energy_vs_distance_plot: doubledeepms__persite_energy_vs_distance_plot

In lehner-lab/doubledeepms: Analysis scripts to reproduce the figures and results from doubleDeepPCA manuscript

doubledeepms__persite_energy_vs_distance_plot

Description

Create results folder for analysis script plots and saved objects.

Usage

doubledeepms__persite_energy_vs_distance_plot(input_dt, outpath,
  colour_scheme, literature_sites = c(), trait_name = "folding",
  absolute_value = T, threshold_residues = "proximal")

Arguments

input_dt	input data table (required)
outpath	plot output path (required)
colour_scheme	colour scheme file (required)
literature_sites	literature allosteric sites (default:empty vector)
trait_name	trait name (default:folding)
absolute_value	absolute value of the trait (default:T)
threshold_residues	residues used to determine regulatory threshold: either "proximal" or "distal" (default:"proximal")

Value

Allosteric positions

lehner-lab/doubledeepms documentation built on July 21, 2023, 4:10 a.m.