API for lehner-lab/tardbpdms
Analysis scripts for processing TDP-43 DMS data from Bolognesi et al. 2019.
| Global functions | |
|---|---|
| PWI_datatable_to_matrix | Source code |
| tardbpdms | Man page Source code |
| tardbpdms_PWI_heatmaps | Man page Source code |
| tardbpdms__aa_properties | Man page Source code |
| tardbpdms__aa_properties_pca | Man page Source code |
| tardbpdms__aa_properties_pca_doubles_loadings | Man page Source code |
| tardbpdms__aa_properties_pca_singles_loadings | Man page Source code |
| tardbpdms__aa_properties_singles_loadings | Man page Source code |
| tardbpdms__create_dir | Man page Source code |
| tardbpdms__format_dir | Man page Source code |
| tardbpdms__gg_color_hue | Man page Source code |
| tardbpdms__ggpairs_binhex | Man page Source code |
| tardbpdms__glm_prenorm | Man page Source code |
| tardbpdms__guenther_structure_propensity_plot | Man page Source code |
| tardbpdms__load_toxicity | Man page Source code |
| tardbpdms__plot_loadings | Man page Source code |
| tardbpdms__plot_toxicity_distributions | Man page Source code |
| tardbpdms__plot_toxicity_vs_growthrate | Man page Source code |
| tardbpdms__plot_toxicity_vs_position | Man page Source code |
| tardbpdms__scale_toxicity | Man page Source code |
| tardbpdms__single_mutant_heatmap | Man page Source code |
| tardbpdms__tile_heatmap_wrapper | Man page Source code |
| tardbpdms__toxicity_lm_summary | Man page Source code |
| tardbpdms_aa_properties_mutant_effects | Man page Source code |
| tardbpdms_agg_tools_mutant_effects | Man page Source code |
| tardbpdms_combine_toxicity | Man page Source code |
| tardbpdms_dimsumcounts_to_fitness | Man page Source code |
| tardbpdms_epistasis_analysis | Man page Source code |
| tardbpdms_guenther_structure_propensities | Man page Source code |
| tardbpdms_human_disease_mutations | Man page Source code |
| tardbpdms_num_introduced_aa_violins | Man page Source code |
| tardbpdms_quality_control | Man page Source code |
| tardbpdms_secondary_structure_predictions | Man page Source code |
| tardbpdms_single_mutant_heatmaps | Man page Source code |
| tardbpdms_toxicity_model_summary | Man page Source code Source code |
| tardbpdms_wt_hydrophobicity | Man page Source code |
| tau_specificity_score | Source code |
