Files in lehner-lab/tardbpdms
Analysis scripts for processing TDP-43 DMS data from Bolognesi et al. 2019.
DESCRIPTION
LICENSE
NAMESPACE
R/tardbpdms.R
R/tardbpdms_PWI_heatmaps.R
R/tardbpdms__aa_properties.R
R/tardbpdms__aa_properties_pca.R
R/tardbpdms__aa_properties_pca_doubles_loadings.R
R/tardbpdms__aa_properties_pca_singles_loadings.R
R/tardbpdms__aa_properties_singles_loadings.R
R/tardbpdms__create_dir.R
R/tardbpdms__format_dir.R
R/tardbpdms__gg_color_hue.R
R/tardbpdms__ggpairs_binhex.R
R/tardbpdms__glm_prenorm.R
R/tardbpdms__guenther_structure_propensity_plot.R
R/tardbpdms__load_toxicity.R
R/tardbpdms__plot_kernel_structure_propensity.R
R/tardbpdms__plot_loadings.R
R/tardbpdms__plot_toxicity_distributions.R
R/tardbpdms__plot_toxicity_vs_growthrate.R
R/tardbpdms__plot_toxicity_vs_position.R
R/tardbpdms__scale_toxicity.R
R/tardbpdms__single_mutant_heatmap.R
R/tardbpdms__tile_heatmap_wrapper.R
R/tardbpdms__toxicity_lm_summary.R
R/tardbpdms_aa_properties_mutant_effects.R
R/tardbpdms_agg_tools_mutant_effects.R
R/tardbpdms_combine_toxicity.R
R/tardbpdms_dimsumcounts_to_fitness.R
R/tardbpdms_epistasis_analysis.R
R/tardbpdms_guenther_structure_propensities.R
R/tardbpdms_human_disease_mutations.R
R/tardbpdms_num_introduced_aa_violins.R
R/tardbpdms_quality_control.R
R/tardbpdms_secondary_structure_predictions.R
R/tardbpdms_single_mutant_heatmaps.R
R/tardbpdms_toxicity_model_summary.R
R/tardbpdms_wt_hydrophobicity.R
README.md
man/tardbpdms.Rd
man/tardbpdms_PWI_heatmaps.Rd
man/tardbpdms__aa_properties.Rd
man/tardbpdms__aa_properties_pca.Rd
man/tardbpdms__aa_properties_pca_doubles_loadings.Rd
man/tardbpdms__aa_properties_pca_singles_loadings.Rd
man/tardbpdms__aa_properties_singles_loadings.Rd
man/tardbpdms__create_dir.Rd
man/tardbpdms__format_dir.Rd
man/tardbpdms__gg_color_hue.Rd
man/tardbpdms__ggpairs_binhex.Rd
man/tardbpdms__glm_prenorm.Rd
man/tardbpdms__guenther_structure_propensity_plot.Rd
man/tardbpdms__load_toxicity.Rd
man/tardbpdms__plot_loadings.Rd
man/tardbpdms__plot_toxicity_distributions.Rd
man/tardbpdms__plot_toxicity_vs_growthrate.Rd
man/tardbpdms__plot_toxicity_vs_position.Rd
man/tardbpdms__scale_toxicity.Rd
man/tardbpdms__single_mutant_heatmap.Rd
man/tardbpdms__tile_heatmap_wrapper.Rd
man/tardbpdms__toxicity_lm_summary.Rd
man/tardbpdms_aa_properties_mutant_effects.Rd
man/tardbpdms_agg_tools_mutant_effects.Rd
man/tardbpdms_combine_toxicity.Rd
man/tardbpdms_dimsumcounts_to_fitness.Rd
man/tardbpdms_epistasis_analysis.Rd
man/tardbpdms_guenther_structure_propensities.Rd
man/tardbpdms_human_disease_mutations.Rd
man/tardbpdms_num_introduced_aa_violins.Rd
man/tardbpdms_quality_control.Rd
man/tardbpdms_secondary_structure_predictions.Rd
man/tardbpdms_single_mutant_heatmaps.Rd
man/tardbpdms_toxicity_model_summary.Rd
man/tardbpdms_wt_hydrophobicity.Rd
