tardbpdms__plot_toxicity_distributions: tardbpdms__plot_toxicity_distributions

In lehner-lab/tardbpdms: Analysis scripts for processing TDP-43 DMS data from Bolognesi et al. 2019.

Description

Plot toxicity distributions (and optional vertical lines highlighting specific toxicity values).

Usage

tardbpdms__plot_toxicity_distributions(input_dt, output_file,
  boundary_list = NULL, boundary_colour_list = NULL, xlim = NULL,
  colour_scheme = NULL, width = 6, height = 13,
  facet_by_mut_type = T)

Arguments

input_dt	a data.table with columns: STOP, toxicity_cond, region, mut_type (required)
output_file	path to output plot (required)
boundary_list	a list of toxicity values to highlight with vertical lines on plot
boundary_colour_list	a list of colours corresponding the boundary_list vertical lines
xlim	x axis limits
colour_scheme	colour scheme list
width	plot width
height	plot height
facet_by_mut_type	facet by mut_type (default:T)

Value

Nothing

lehner-lab/tardbpdms documentation built on July 19, 2019, 7:24 p.m.