tardbpdms_wt_hydrophobicity: tardbpdms_wt_hydrophobicity

In lehner-lab/tardbpdms: Analysis scripts for processing TDP-43 DMS data from Bolognesi et al. 2019.

Description

Hydrophobicity of WT and toxicity hotspot line plot.

Usage

tardbpdms_wt_hydrophobicity(toxicity_dt, outpath, aaprop_file,
  aaprop_file_selected, wtfasta_path, colour_scheme, execute = TRUE)

Arguments

toxicity_dt	data.table with single and double mutant toxicity values and their mutant effects from AA PCA (required)
outpath	output path for plots and saved objects (required)
aaprop_file	path to amino acid properties file (required)
aaprop_file_selected	path to file with selected subset of identifiers
wtfasta_path	path to WT FASTA sequence file (required)
colour_scheme	colour scheme file (required)
execute	whether or not to execute the analysis (default: TRUE)

Value

Nothing

lehner-lab/tardbpdms documentation built on July 19, 2019, 7:24 p.m.