BGFREQS: Amino Acid Residue Background Frequencies for Kongdom All
In leonjessen/PepTools: PepTools - An R-package for making immunoinformatics accessible
Description
Usage
Format
Source
Description
Background distribution frequencies for Kullback-Leibler calculation is from:
Proteome-pI: proteome isoelectric point database
Lukasz P. Kozlowski
Nucleic Acids Research, Volume 45, Issue D1, 4 January 2017, Pages D1112–
D1116, https://doi.org/10.1093/nar/gkw978
Usage
1
Format
A named numeric vector with 20 elements:
- name
One-letter symbol for each of the 20 standard proteogenic amino acids
- value
The background frequency for kingdom all
Source
https://academic.oup.com/nar/article/45/D1/D1112/2333931
leonjessen/PepTools documentation built on May 29, 2019, 3:40 a.m.
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Description Usage Format Source
Description
Background distribution frequencies for Kullback-Leibler calculation is from: Proteome-pI: proteome isoelectric point database Lukasz P. Kozlowski Nucleic Acids Research, Volume 45, Issue D1, 4 January 2017, Pages D1112– D1116, https://doi.org/10.1093/nar/gkw978
Usage
1 |
Format
A named numeric vector with 20 elements:
- name
One-letter symbol for each of the 20 standard proteogenic amino acids
- value
The background frequency for kingdom all
Source
https://academic.oup.com/nar/article/45/D1/D1112/2333931
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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