Description Usage Arguments Value Examples
From a matrix of amino acid frequencies, where the peptide positions are the
rows and where the amino acids are the columns and the sum of the
rows all are equal to one, calculate the compute the Kullback-Leibler
Divergence for each [p_i,res_j]
1 | pssm_kld(PSSM)
|
PSSM |
A Position Specific Scoring Matrix of amino acid frequencies |
A PSSM of computed Kullback-Leibler Divergences for each [p_i,res_j]
1 | pep_ran(n = 100, k = 9) %>% pssm_freqs %>% pssm_kld
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.