In leylabmpi/LeyLabRMisc: Ley Lab misc R functions, rmd templates, etc.

knitr::opts_chunk$set(echo = TRUE)
knitr::opts_chunk$set(dpi = 200)
knitr::opts_chunk$set(fig.align = "center")
knitr::opts_chunk$set(rows.print = 5)
knitr::opts_chunk$set(max.print = 100)

Introduction

What is the purpose of this doc (eg., the goals of this analysis)?

Setup

Paths & Params

work_dir = '/path/to/working/dir/'
infile = '/path/to/input/table'
threads = 8

Libraries

library(dplyr)
library(tidyr)
library(ggplot2)

Misc init

set.seed(8374)   

Analysis

Loading & processing data...

Example table

mtcars

Example plot

plot(pressure)
# for 2 figures in 2 columns: {r out.width=c('50%', '50%'), fig.show='hold'}

Summary

Conclusions about the analysis...

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SessionInfo

sessionInfo()

leylabmpi/LeyLabRMisc documentation built on Nov. 3, 2022, 3:45 p.m.