subsetByFeatures: Subset a GeneSetDb to only include geneSets with specified...
In lianos/multiGSEA: A unified interface to a plethora of gene set enrichment analysis methods
Description
Usage
Arguments
Value
Examples
Description
Subset a GeneSetDb to only include geneSets with specified features.
Usage
1
subsetByFeatures(x, features, value = c("feature_id", "x.id", "x.idx"), ...)
Arguments
x
GeneSetDb
featureIds
Character vector of featureIds
Value
A subset of x which contains only the geneSets that contain
features found in featureIds
Examples
1
2
3
gdb <- exampleGeneSetDb()
features <- c("55839", "8522", "29087")
(gdb.sub <- subsetByFeatures(gdb, features))
lianos/multiGSEA documentation built on Nov. 17, 2020, 1:26 p.m.
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Description Usage Arguments Value Examples
Description
Subset a GeneSetDb to only include geneSets with specified features.
Usage
1 | subsetByFeatures(x, features, value = c("feature_id", "x.id", "x.idx"), ...)
|
Arguments
x |
|
featureIds |
Character vector of featureIds |
Value
A subset of x which contains only the geneSets that contain
features found in featureIds
Examples
1 2 3 | gdb <- exampleGeneSetDb()
features <- c("55839", "8522", "29087")
(gdb.sub <- subsetByFeatures(gdb, features))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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