compute_synchrony: Compute the synchrony based on Tilted-CCA
In linnykos/multiomicCCA: Tilted CCA
View source: R/compute_synchrony.R
compute_synchrony R Documentation
Compute the synchrony based on Tilted-CCA
Description
Compute the synchrony based on Tilted-CCA
Usage
compute_synchrony(input_obj, anchor_modality = 1)
Arguments
input_obj
multiSVD class, after applying tiltedCCA_decomposition()
anchor_modality
numeric of 1 or 2, denoting which modality the synchrony is computed on
Value
a matrix with n cells and 2 columns, which one column
(named synchrony) denotes the synchrony score (between 0 and 1, where a number closer to 1 means
the cell is synchronous between both modalities) and
(named synchrony_rescaled), which is simply a monotone transformation
of the first column for easier visualization
linnykos/multiomicCCA documentation built on July 17, 2025, 3:16 a.m.
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View source: R/compute_synchrony.R
| compute_synchrony | R Documentation |
Compute the synchrony based on Tilted-CCA
Description
Compute the synchrony based on Tilted-CCA
Usage
compute_synchrony(input_obj, anchor_modality = 1)
Arguments
input_obj |
|
anchor_modality |
numeric of |
Value
a matrix with n cells and 2 columns, which one column
(named synchrony) denotes the synchrony score (between 0 and 1, where a number closer to 1 means
the cell is synchronous between both modalities) and
(named synchrony_rescaled), which is simply a monotone transformation
of the first column for easier visualization
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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