form_metacells: Include meta-cell information to multiSVD

In linnykos/multiomicCCA: Tilted CCA

Include meta-cell information to multiSVD

Description

Include the hard clustering information and compute the meta-cells for an existing multiSVD object.

Usage

form_metacells(
  input_obj,
  large_clustering_1,
  large_clustering_2,
  num_metacells = NULL,
  min_size = 5,
  verbose = 0
)

Arguments

input_obj	multiSVD class, after creation via create_multiSVD()
large_clustering_1	factor among the n cells or NULL, representing the hard clustering structure of Modality 1
large_clustering_2	factor among the n cells or NULL, representing the hard clustering structure of Modality 2
num_metacells	number of desired meta-cells
min_size	smallest number of cells for a meta-cell
verbose	non-negative integer

Value

updated multiSVD object

linnykos/multiomicCCA documentation built on July 17, 2025, 3:16 a.m.