postprocess_cell_enrichment.multiSVD: Computing cell enrichments for multiSVD object

In linnykos/multiomicCCA: Tilted CCA

Computing cell enrichments for multiSVD object

Description

Computing cell enrichments for multiSVD object

Usage

## S3 method for class 'multiSVD'
postprocess_cell_enrichment(
  input_obj,
  membership_vec,
  max_subsample = min(1000, length(membership_vec)),
  verbose = 0,
  ...
)

Arguments

input_obj	multiSVD object, after using tiltedCCA_decomposition()
membership_vec	factor vector of the same length as the number of cells in multiSVD, denoting the cell-types for each cell
max_subsample	maximum of cells to sample for each cell-type. If there are more than max_subsample cells in a cell-type (dictated by membership_vec), a random subset of cells will be selected for the sake of this function
verbose	non-negative integer
...	additional arguments

linnykos/multiomicCCA documentation built on July 17, 2025, 3:16 a.m.