dot-compute_cca_aggregate_matrix: Helper function with the CCA function

In linnykos/multiomicCCA: Tilted CCA

Helper function with the CCA function

Description

Called by the .cca function. Recall when computing CCA, the main matrix we need compute is, roughly speaking, half-inverse of the first covariance times the cross-covariance matrix times the half-inverse of the second covariance. If we had the SVD of the two original matrices, this is actually equivalent to the product of the left singular vectors.

Usage

.compute_cca_aggregate_matrix(svd_1, svd_2, augment)

Arguments

svd_1	SVD of the denoised variant of mat_1 from dcca_factor
svd_2	SVD of the denoised variant of mat_2 from dcca_factor
augment	boolean. If TRUE, augment the matrix with either rows or columns with 0's so the dimension of the output matrix matches those in svd_1 and svd_2

Value

matrix

linnykos/multiomicCCA documentation built on July 17, 2025, 3:16 a.m.