read.fMRI.data: Reads .nii and .img/.hdr file data and save to neuR-object

In livioivil/neuR: R package for neuroscience data processing and statistical analysis of neuro-data

Description

Reads .nii and .img/.hdr file data and save to neuR-object

Usage

read.fMRI.data(path = ".", pattern = "s.*\\.img", files = NULL,
  mask = "constant", info = NULL, silent = FALSE, exclude.files = c(),
  header.file = NULL, max.nas.prop.per.voxels = NULL)

Arguments

path	"."
pattern	"s.*\.img"
files	NULL
mask	it can be: a file name, a 3D array of appropriate size, a string equal to 'constant' (look for non constant voxels) or a scalar (values equal to this number are out of the brain)
info	NULL
silent	FALSE
exclude.files	vector of ids of files to exclude
header.file	name of the file from which the head should be read. if NULL (default) the head of the first file (not excluded by exclude.files) is used
max.nas.prop.per.voxels	(NULL by default, no actions taken) is the maximum proportion of NAs allowed among replications in anny given voxel.

Value

a neuR-object

livioivil/neuR documentation built on May 21, 2019, 6:43 a.m.