dist.internode: find the distance of two taxa
In lliu1871/phybase: Basic functions for phylogenetic analysis
dist.internode R Documentation
find the distance of two taxa
Description
This function calculates the distance of two sequences on the basis of number of ancestors between two sequences.
Usage
dist.internode(tree, taxaname)
Arguments
tree
a tree in the Newick format
taxaname
taxa names
Author(s)
Liang Liu
Examples
treestr<-"((((H:0.1,C:0.1):0.1,G:0.1):0.1,O:0.1):0.1,W:0.1);"
taxaname<-species.name(treestr)
dist.internode(treestr, taxaname)
lliu1871/phybase documentation built on April 21, 2024, 3:16 a.m.
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| dist.internode | R Documentation |
find the distance of two taxa
Description
This function calculates the distance of two sequences on the basis of number of ancestors between two sequences.
Usage
dist.internode(tree, taxaname)
Arguments
tree |
a tree in the Newick format |
taxaname |
taxa names |
Author(s)
Liang Liu
Examples
treestr<-"((((H:0.1,C:0.1):0.1,G:0.1):0.1,O:0.1):0.1,W:0.1);"
taxaname<-species.name(treestr)
dist.internode(treestr, taxaname)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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