dot-ModelPvalue: Returns the variance array after permutations.

In lusystemsbio/sRACIPE: Systems biology tool to simulate gene regulatory circuits

Returns the variance array after permutations.

Description

A utility function.

Usage

.ModelPvalue(
  dataSimulation,
  dataReference,
  clusterCut,
  permutations,
  refClusterVar,
  corMethod,
  simulatedClusterVar
)

Arguments

dataSimulation	Simulation data to be compared.
dataReference	Reference data with which to compare.
clusterCut	The original cluster assignments.
permutations	The number of permutations.
refClusterVar	SD of the clusters.
corMethod	Correlation method to be used.
simulatedClusterVar	Variance of simulated clusters

Value

An array of dimension n.models by nClusters by permutations.

lusystemsbio/sRACIPE documentation built on Dec. 9, 2024, 8:25 a.m.