MaxMin.Sym.Row: Filter out duplicated genes getting the maximum or the...

In machalen/AnalysisFunctions: Package with basic analysis functions for genomic data

Description

When there are repeated Gene IDs in a matrix this function resolves those duplicated elements getting the gene value with the minimum or the maximum value in another column.

Usage

MaxMin.Sym.Row(Annot.Table, ColField, operator = "Max", colName = "Symbol")

Arguments

Annot.Table	Matrix with rows equal to geneId.
ColField	Name of the column used to chose the minimum or the maximum value of repeated gene Ids.
operator	Maximum or minimum operator to apply.
colName	Name of the column with symbol IDs.

Details

When there are repeated Gene IDs in the column colName in a matrix this function resolves those duplicated elements getting the gene value with the minimum or the maximum value in the column ColField.

Value

Matrix without repeated GeneIDs in the column colName.

Author(s)

Magdalena Arnal Segura <[e-mail]>

machalen/AnalysisFunctions documentation built on Nov. 11, 2019, 10:26 a.m.