createTargets: Target file with sample anotation

In machalen/AnalysisFunctions: Package with basic analysis functions for genomic data

Description

This function creates the target file in tabulated (.txt) format with sample annotation to use in microarray and NGS analysis. The name of the samples in ordered as the one in the R objects to avoid possible mistakes.

Usage

createTargets(names, fileName = "Targets.txt", DestDir = analysisDir)

Arguments

names	Vector with sample names as they appear in the R matrix to analyze. Same name and same order.
fileName	Name of the output file, default is Targets.txt
DestDir	Name of the output directory

Details

The output file has to be manually filled in a posteriori with the clinical data or sample information of interest.

Value

Tabulated separated (.txt) file

Author(s)

Magdalena Arnal Segura <[e-mail]>

machalen/AnalysisFunctions documentation built on Nov. 11, 2019, 10:26 a.m.