Description Usage Arguments Details Value Author(s)
View source: R/Unique.Sym.Estimates.R
This function removes duplicated gene IDs by calculating the mean or the median of their expression values
1 | Unique.Sym.Estimates(Annot.Table, operator = "Mean", colName = "Symbol")
|
Annot.Table |
Numeric data frame with a unique column of characters corresponding to the gene IDs, the other columns are samples. |
operator |
Mean or median operator to resolve repeated gene IDs |
colName |
Name of the column that contains gene symbols. |
A gene expression matrix can have repeated gene IDs due to exon or probe annotation. Some methods need to be unique gene ID based. To summarize expression values to a single geneID the mean and median operators can be applied.
Numeric data frame where row names are gene IDs
Magdalena Arnal Segura <marnal@imim.es>
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