In maialab/quincunx: REST API Client for the 'PGS' Catalog

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.width = 7,
  fig.height = 5,
  fig.align = "center"
)
options(tibble.print_min = 4, tibble.print_max = 4)
library(quincunx)

The function get_releases() gets you information about PGS Catalog releases; namely, the number of newly released polygenic scores, publications and performance metrics, as well as their respective associated identifiers (i.e., new pgs_ids, pgp_ids and ppm_ids).

Latest release of the PGS Catalog

To get information about the latest release, run get_releases() with default argument values:

get_releases() # Or get_releases(date = 'latest')

Release by date

You can use the argument date to select a specific date (if a release exists for this day) in the format "YYYY-MM-DD", e.g., "2020-11-20":

get_releases(date = '2020-11-20')

All releases

(all_releases <- get_releases(date = 'all'))

maialab/quincunx documentation built on Aug. 18, 2022, 5:31 a.m.