malnirav/hiReadsProcessor: Functions to process LM-PCR reads from 454/Illumina data
hiReadsProcessor contains set of functions which allow users to process LM-PCR products sequenced using any platform. Given an excel/txt file containing parameters for demultiplexing and sample metadata, the functions automate trimming of adaptors and identification of the genomic product. Genomic products are further processed for QC and abundance quantification.
Getting started
Browse package contents
Package details |
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| Author | Nirav V Malani <malnirav@gmail.com> |
| Bioconductor views | Preprocessing Sequencing |
| Maintainer | Nirav V Malani <malnirav@gmail.com> |
| License | GPL-3 |
| Version | 1.29.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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