Man pages for mammerlin/sangeranalyseR
sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R
| count.stop.codons | Count stop codons in a DNA sequence |
| make.consensus.seqs | Automatically make consensus sequences by grouping .ab1 files... |
| make.readset | Make a readset |
| make.readsets | Automatically load readsets by grouping .ab1 files by name. |
| merge.reads | Merge sequence reads into a single consensus sequence |
| secondary.peaks | Check for secondary peaks in a sangerseq object |
| summarise.abi.file | Create a detailed summary of a single ABI sequencing file |
| summarise.abi.folder | Create detailed summaries of all ABI sequencing reads in a... |
| summarise.merged.read | Produce a one-row summary of a merged read |
| trim.mott | Trim a sequences with Mott's modified trimming algorithm |
| trim.to.reference | Trim an alignment to the limits of a supplied reference... |
