count.stop.codons: Count stop codons in a DNA sequence
In mammerlin/sangeranalyseR: sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R
Description
Count stop codons in a DNA sequence
Usage
1
count.stop.codons(sequence, reading.frame = 1, genetic.code = GENETIC_CODE)
Arguments
sequence
a DNAString object
reading.frame
a number from 1 to 3 denoting the reading frame of the sequence
genetic.code
Named character vector in the same format as GENETIC_CODE (the default), which represents the standard genetic code. This is the code with which the function will attempt to translate your DNA sequences. You can get an appropriate vector with the getGeneticCode() function. The default is the standard code.
mammerlin/sangeranalyseR documentation built on May 13, 2019, 1:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Count stop codons in a DNA sequence
Usage
1 | count.stop.codons(sequence, reading.frame = 1, genetic.code = GENETIC_CODE)
|
Arguments
sequence |
a DNAString object |
reading.frame |
a number from 1 to 3 denoting the reading frame of the sequence |
genetic.code |
Named character vector in the same format as GENETIC_CODE (the default), which represents the standard genetic code. This is the code with which the function will attempt to translate your DNA sequences. You can get an appropriate vector with the getGeneticCode() function. The default is the standard code. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.