trim.to.reference: Trim an alignment to the limits of a supplied reference...

Description Usage Arguments

Description

This function profile aligns the alignment to the reference sequence. It then trims the alignment to the limits of the reference sequence, and returns the trimmed alignment.

Usage

1
trim.to.reference(alignment, reference)

Arguments

alignment

a DNAStringSet object

reference

a DNA sequence as a DNAString sequence


mammerlin/sangeranalyseR documentation built on May 13, 2019, 1:08 p.m.