API for marcalva/diem
Debris-Containing Droplet Identification using EM

Global functions
Alpha	Man page Source code
LlkDirMultSparsePar	Source code
LlkMultSparsePar	Source code
SCE	Man page
SCE-class	Man page
assign_clusters	Man page Source code
barcode_rank_plot	Man page Source code
call_targets	Man page Source code
clusters	Man page Source code
colnames.SCE	Source code
condense_labs	Man page Source code
convert_to_seurat	Man page Source code
create_SCE	Man page Source code
de_basic	Man page Source code
de_ttest	Man page Source code
de_ttest_all	Man page Source code
debris_genes	Man page Source code
dim.SCE	Source code
dirmult_alpha_loo	Source code
dirmult_alpha_ml	Source code
dirmult_alpha_mom	Source code
dirmult_em	Source code
divide_by_colsum	Man page Source code
droplet_data	Man page Source code
estimate_dbr_score	Man page Source code
fast_varCPP	Source code
fast_wmeanCPP	Source code
fast_wvarCPP	Source code
fill_counts	Man page Source code
filter_genes	Man page Source code
fraction_log	Man page Source code
gene_data	Man page Source code
get_clean_ids	Man page Source code
get_gene_pct	Man page Source code
get_pcs	Man page Source code
get_removed_ids	Man page Source code
get_var_genes	Man page Source code
init	Man page Source code
max_loo	Source code
mb_small	Man page
merge_size	Man page Source code
mult_alpha_ml	Source code
mult_em	Source code
mult_pi_ml	Source code
mult_z_ml	Source code
norm_counts	Man page Source code
normalize_data	Man page Source code
params_frm_clust	Man page Source code
plot_clust	Man page Source code
plot_data	Man page Source code
plot_dbr_score	Man page Source code
plot_umi_gene	Man page Source code
raw_counts	Man page Source code
read_10x	Man page Source code
rownames.SCE	Source code
run_em	Man page Source code
run_pca	Man page Source code
set_breaks_10	Source code
set_debris_test_set	Man page Source code
sum_log	Man page Source code
summarize_clusters	Man page Source code
top_genes	Man page Source code
z_table	Man page Source code