assign_clusters: Assign clusters to droplets from EM
In marcalva/diem: Debris-Containing Droplet Identification using EM
assign_clusters R Documentation
Assign clusters to droplets from EM
Description
Assign cluster for each droplet in the test set, along with its
cluster probability. These can be retrieved using the
droplet_data function. Only allow clusters with
at least min_drop droplets.
Usage
assign_clusters(x)
Arguments
x
An SCE object.
Value
An SCE object.
Examples
sce <- assign_clusters(sce, type="test")
drop_data <- droplet_data(sce)
table(drop_data[,"Cluster"])
summary(drop_data[,"ClusterProb"])
marcalva/diem documentation built on Jan. 1, 2023, 2:33 a.m.
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| assign_clusters | R Documentation |
Assign clusters to droplets from EM
Description
Assign cluster for each droplet in the test set, along with its
cluster probability. These can be retrieved using the
droplet_data function. Only allow clusters with
at least min_drop droplets.
Usage
assign_clusters(x)
Arguments
x |
An SCE object. |
Value
An SCE object.
Examples
sce <- assign_clusters(sce, type="test") drop_data <- droplet_data(sce) table(drop_data[,"Cluster"]) summary(drop_data[,"ClusterProb"])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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