fillMqparTemplate: fills a template mqpar string with the given infos

In mariodejung/samplesubmission: Sample Submission User Web Interface

Description

fills a template mqpar string with the given infos

Usage

fillMqparTemplate(parameterGroups, fastaFiles, rawFiles = NULL,
  templateFile = "mqpar.tmp.xml", fixedFolder = "")

Arguments

fastaFiles	vector of fasta files paths
rawFiles	optionaly vector of raw files paths
templateFile	template File path
paramterGroups	list of parameterGroups settings (mode, enzymes)

Value

filled mqpar string

Examples

## Not run: 
fillMqparTemplate( list(list(mode=0, enzyme=c('LysC','GluC'))), c("human.fasta", "yeast.fasta"))

## End(Not run)

mariodejung/samplesubmission documentation built on May 3, 2019, 1:34 p.m.