train_calibration_model_ridge: Train calibration model with ridge regularization.

In markgene/yamatClassifier: Yet Another Methylation Array Toolkit: Classifier

Train calibration model with ridge regularization.

Description

Train calibration model with ridge regularization.

Usage

train_calibration_model_ridge(
  X,
  y,
  youden_index_threshold = 0.9,
  lambda_min_ratio = 1e-06,
  cv_glmnet_nfolds = 3
)

Arguments

X	a matrix of predicted values.
y	a factor vector of response.
youden_index_threshold	the threshold. Default to 0.9.
lambda_min_ratio	see lambda.min.ratio of glmnet.
cv_glmnet_nfolds	see nfolds of cv.glmnet.

Value

calibration result.

markgene/yamatClassifier documentation built on Oct. 14, 2024, 2:36 a.m.