Files in mathewchamberlain/veni
Generates QC plots, performs ambient RNA removal, and enhanced differential from single cell RNA sequencing data
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/veni.R
README.md
images/sanofi_logo.png
man/BatchProblemPlot.Rd
man/CellBarPlot.Rd
man/CoverageBoxPlot.Rd
man/Decontaminate.Rd
man/DepthBoxPlot.Rd
man/DepthPlot.Rd
man/DepthPlotComparison.Rd
man/FilterBackgroundMatrix.Rd
man/FilterBarcodes.Rd
man/FilterMito.Rd
man/GeneBoxPlot.Rd
man/GenerateLbls.Rd
man/GenerateSeuratObject.Rd
man/GetBackground.Rd
man/GetBackgroundFromMatrix.Rd
man/GetBackgroundMatrix.Rd
man/GetCutoffs.Rd
man/GetGeneFromNetwork.Rd
man/GetMito.Rd
man/HClustBackgroundMatrix.Rd
man/InspectBackground.Rd
man/InspectBackgroundGenes.Rd
man/InspectBackgroundMatrix.Rd
man/JackD.Rd
man/LoadTxt.Rd
man/LoadTxtFolder.Rd
man/MitoBoxPlot.Rd
man/QCPlots.Rd
man/Read10Xh5.Rd
man/Read10Xh5Folder.Rd
man/ReadCelseq.Rd
man/ReadDeconth5.Rd
man/ReadDeconth5Folder.Rd
man/ReadIndrop.Rd
man/ReadIndropFolder.Rd
man/RegressMito.Rd
man/SaveCountsToH5.Rd
man/SaveNetworkH5.Rd
man/array_split.Rd
veni.Rproj
vignettes/footer.html
vignettes/human-mouse.Rmd
vignettes/human-mouse.html
vignettes/human-mouse_files/figure-html/unnamed-chunk-10-1.png
vignettes/human-mouse_files/figure-html/unnamed-chunk-11-1.png
vignettes/human-mouse_files/figure-html/unnamed-chunk-12-1.png
vignettes/human-mouse_files/figure-html/unnamed-chunk-8-1.png
vignettes/human-mouse_files/figure-html/unnamed-chunk-9-1.png
