DepthBoxPlot: Plot a boxplot for sequencing depth

Description Usage Arguments Value See Also

View source: R/veni.R

Description

Plot a boxplot for sequencing depth

Usage

1
DepthBoxPlot(E, order.by = c("average depth", "mito percentage")[1])

Arguments

E

Count matrix (see ?Read_h5)

order.by

Order by a quantity associated with each sample. Options are "average depth" or "mito percentage", default is AvgDepth.

Value

ggplot objects ordered by average depth

See Also

GeneBoxPlot; CoverageBoxPlot


mathewchamberlain/veni documentation built on Oct. 9, 2020, 2:30 a.m.