GeneBoxPlot: Plot a boxplot for a single gene
In mathewchamberlain/veni: Generates QC plots, performs ambient RNA removal, and enhanced differential from single cell RNA sequencing data
Description
Usage
Arguments
Value
See Also
Description
Plot a boxplot for a single gene
Usage
1
GeneBoxPlot(E, gene, order.by = c("average depth", "mito percentage")[1])
Arguments
E
Count matrix (see ?Read_h5)
gene
Gene to boxplot
order.by
Order by a quantity associated with each sample. Options are "average depth" or "mito percentage", default is AvgDepth.
Value
ggplot objects
See Also
DepthPlot; DepthPlotComparison; QCPlots
mathewchamberlain/veni documentation built on Oct. 9, 2020, 2:30 a.m.
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Description Usage Arguments Value See Also
Description
Plot a boxplot for a single gene
Usage
1 | GeneBoxPlot(E, gene, order.by = c("average depth", "mito percentage")[1])
|
Arguments
E |
Count matrix (see ?Read_h5) |
gene |
Gene to boxplot |
order.by |
Order by a quantity associated with each sample. Options are "average depth" or "mito percentage", default is AvgDepth. |
Value
ggplot objects
See Also
DepthPlot; DepthPlotComparison; QCPlots
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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