GR2gtf: Export GRanges to gtf format

In matthiasheinig/seqQTL: Package for preprocessing sequencing based traits for QTL analysis

Description

Export GRanges to gtf format

Usage

GR2gtf(regions, filename, feature.type = "experimental_feature",
  src = "GenomicRanges", score = ".", phase = ".", attributes = NULL,
  ...)

Arguments

regions	GRanges object to be saved
filename	name of the gtf file
feature.type	character for the feature type field
src	character for the source type field
score	numeric or character for the score field
phase	numeric or character for the phase field
attributes	character vector of columns to be saved
...	additional arguments passed to write.table

matthiasheinig/seqQTL documentation built on May 21, 2019, 1:16 p.m.