get.rpkm: Normalize to reads per kilobase per million sequences
In matthiasheinig/seqQTL: Package for preprocessing sequencing based traits for QTL analysis
Description
Usage
Arguments
Value
Description
Normalize to reads per kilobase per million sequences
Usage
1
get.rpkm(annotation, counts)
Arguments
annotation
GRanges object with exons that have a "gene_id" field in
the meta data
counts
read count matrix per gene. The rownames have to be the same as
those used in the gene_id field.
Value
matrix of RPKM values
matthiasheinig/seqQTL documentation built on May 21, 2019, 1:16 p.m.
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Description Usage Arguments Value
Description
Normalize to reads per kilobase per million sequences
Usage
1 | get.rpkm(annotation, counts)
|
Arguments
annotation |
GRanges object with exons that have a "gene_id" field in the meta data |
counts |
read count matrix per gene. The rownames have to be the same as those used in the gene_id field. |
Value
matrix of RPKM values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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