get.htseq.count.matrix: Get a count matrix from htseq-count files that match a...

Description Usage Arguments Value

View source: R/gff.R

Description

Get a count matrix from htseq-count files that match a filename pattern

Usage

1

Arguments

dir

name of the directory that contains the bam files

pattern

regulator expression to identify bam files in the directory

Value

a count matrix with rows for each element of the GRanges object and columns for each bam file


matthiasheinig/seqQTL documentation built on May 21, 2017, 11:03 p.m.