gtf2GR: Read gene annotations in gtf format
In matthiasheinig/seqQTL: Package for preprocessing sequencing based traits for QTL analysis
Description
Usage
Arguments
Value
Description
Read gene annotations in gtf format
Usage
1
Arguments
filename
gtf filename
gtfAttrNames
character vector with attribute names that should be
parsed from the gtf file. Usually these are "gene_id", "gene_name",
"transcript_id" and the like. By default no attributes are parsed.
Value
a GRanges object with all entries from the gtf file with metadata
columns for source, type and the attributes parsed
matthiasheinig/seqQTL documentation built on May 21, 2019, 1:16 p.m.
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Description Usage Arguments Value
Description
Read gene annotations in gtf format
Usage
1 |
Arguments
filename |
gtf filename |
gtfAttrNames |
character vector with attribute names that should be parsed from the gtf file. Usually these are "gene_id", "gene_name", "transcript_id" and the like. By default no attributes are parsed. |
Value
a GRanges object with all entries from the gtf file with metadata columns for source, type and the attributes parsed
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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