in.centromere: Return an index of segments that are in the centromere, for a...

Description Usage Arguments Details Value

View source: R/inCentromere.R

Description

Return an index of segments that are in the centromere, for a given chromosome

Usage

1
in.centromere(start.pos, end.pos, ref.cent.start, ref.cent.end)

Arguments

start.pos

start position of the segment

end.pos

end position of the segment

ref.cent.start

start position of the centromere

ref.cent.end

end position of the centromere

Details

This function returns a logical vector with value of TRUE if the corresponding segment crosses the centromere.

Value

logical index of segments crossing the centromere


maxwell-lab/HRDex documentation built on May 3, 2020, 9:01 p.m.