GetCellEmbeddings: Dimensional Reduction Cell Embeddings Accessor Function

In mayer-lab/SeuratForMayer2018: Seurat : R Toolkit for Single Cell Genomics

Description

Pull cell embeddings matrix for specified stored dimensional reduction analysis

Usage

GetCellEmbeddings(object, reduction.type = "pca", dims.use = NULL,
  cells.use = NULL)

Arguments

object	Seurat object
reduction.type	Type of dimensional reduction to fetch (default is PCA)
dims.use	Dimensions to include (default is all stored dims)
cells.use	Cells to include (default is all cells)

Value

Cell embedding matrix for given reduction, cells, and dimensions

mayer-lab/SeuratForMayer2018 documentation built on May 25, 2019, 9:34 p.m.